October 23, 2023  |  Preprint

OMICmAge: An Integrative Multi-Omics Approach to Quantify Biological Age With Electronic Medical Records

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This study helped develop OMICmAge, integrating DNA methylation and multi-omics data to quantify biological age. The Proteograph platform was leveraged to enhance protein detection and provide deep insights into the aging process.

Abstract

Biological aging is a multifactorial process involving complex interactions of cellular and biochemical processes that is reflected in omic profiles. Using common clinical laboratory measures in ~30,000 individuals from the MGB-Biobank, we developed a robust, predictive biological aging phenotype, EMRAge, that balances clinical biomarkers with overall mortality risk and can be broadly recapitulated across EMRs. We then applied elastic-net regression to model EMRAge with DNA-methylation (DNAm) and multiple omics, generating DNAmEMRAge and OMICmAge, respectively. Both biomarkers demonstrated strong associations with chronic diseases and mortality that outperform current biomarkers across our discovery (MGB-ABC, n=3,451) and validation (TruDiagnostic, n=12,666) cohorts. Through the use of epigenetic biomarker proxies, OMICmAge has the unique advantage of expanding the predictive search space to include epigenomic, proteomic, metabolomic, and clinical data while distilling this in a measure with DNAm alone, providing opportunities to identify clinically-relevant interconnections central to the aging process.

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DOI: 10.1101/2023.10.16.562114

  • Tags
  • Exposome
  • Biomarker Discovery
  • Serum or Plasma
  • Human