This poster demonstrates how the Proteograph™ Analysis Suite and Proteogenomics workflow enables user-friendly and reproducible multi-omics analyses of proteomic and genomic data at scale. PAS provides automated data processing and analysis with intuitive, easy-to-interpret visualizations and its Proteogenomics feature integrates genomic variant calls with proteomics data to identify subject-specific variant peptides, offering a comprehensive proteogenomic analysis software suite that facilitates a seamless journey from raw data to biological insight.